Administrative and structural corruption is recognized as a fundamental challenge in the path of organizational and societal excellence, the effective control of which requires moving beyond imported theories and employing indigenous and efficient models. Accordingly, the present study was conducted with the aim of designing a comprehensive model for organizational health and corruption control based on the Prophetic management style of the Great Prophet (PBUH). This applied research was carried out with a qualitative and inductive approach, based on thematic analysis strategy. The statistical population of the study included valid historical texts, narrations, and documents related to the Prophetic management style (PBUH), which were analyzed using purposive sampling method. In the systematic data analysis process through three steps of open, axial, and selective coding, 62 initial codes were extracted and organized into 9 axial categories. By analyzing conceptual links, the core category of the research was developed as “Systematic Corruption Control; Based on Systemic Balance among Human Capital Development, Institutional Architecture, and Public Oversight.” The findings indicate that the Prophetic model is a tripartite and integrated architecture: First, “Institutional and Structural Architecture” which seeks to institutionally reduce corruption opportunities through establishing the rule of law, procedural transparency, and protection of resources; Second, “Human Capital Development and Excellence” which curbs the internal motivation for violation by integrating meritocracy, ethical empowerment, and managerial rationality; and Third, “Public Oversight and Social Responsibility” which drastically increases the social cost of committing corruption by institutionalizing participatory whistleblowing and accountability. Consequently, the Prophetic style (PBUH), by surpassing reductionist approaches, demonstrates that guaranteeing organizational health depends on the balanced synergy among deterrent structure, competent personnel, and participatory control of stakeholders.